Gene detail information of Glyur001674s00035727.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01380.10transferases;sulfuric ester hydrolases;catalytics;transferases
NRKEH22286.10phosphatidylinositolglycan class N protein [Medicago truncatula]
trEMBLtr|G7L3B0|G7L3B0_MEDTR0Phosphatidylinositolglycan class N protein {ECO:0000313|EMBL:AES78410.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016744566858651+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05285PIGN EC:2.7.-.- Glycosylphosphatidylinositol(GPI)-anchor biosynthesis map00563


Gene Ontology

biological_process

GO:0006506  GPI anchor biosynthetic process

GO:0008152  metabolic process


cellular_component

GO:0005789  endoplasmic reticulum membrane


molecular_function

GO:0003824  catalytic activity

GO:0008484  sulfuric ester hydrolase activity

GO:0016740  transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001674s00035727.1PF00884.18Sulfatase471191.20E-06
Glyur001674s00035727.1PF04987.9PigN2637362.10E-124


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.045
SRR1783600control8.487
SRR1783602moderate drought stress11.865
SRR1811619moderate drought stress11.739

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.042
DRR006520Root Summer glycyrrhizin high producing strain6.836
DRR006521Root Winter glycyrrhizin high producing strain9.449
DRR006522Root Winter glycyrrhizin high producing strain8.789
DRR006523Root Summer glycyrrhizin low producing strain5.584
DRR006524Root Summer glycyrrhizin low producing strain5.786
DRR006525Leaf Summer glycyrrhizin high producing strain3.686
DRR006526Leaf Summer glycyrrhizin high producing strain3.711

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.038
SRR2868004Drought Stress(Tissue:root)13.610
SRR2967015Control (Tissue:root)13.268

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.921
SRR9715740Leave4.453
SRR9715741Leave7.379
SRR9715739Root1.605
SRR9715742Root7.101
SRR9715743Root6.387

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.971
SRR8749028MeJA induced 9h8.488
SRR8749029MeJA induced 9h6.716
SRR8749030Uninduced2.021
SRR8749031Uninduced1.435
SRR8749032Uninduced2.098

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.827
SRR8400027Control-Root15.032

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved