Gene detail information of Glyur001675s00036200.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G32440.11.00E-61plastidial pyruvate kinase 3
NRXP_010663632.11.59E-75PREDICTED: pyruvate kinase isozyme G, chloroplastic isoform X2 [Vitis vinifera]
COGYP_003690565.15.00E-41pyruvate kinase [Desulfurivibrio alkaliphilus AHT2]
Swissprottr|P55964|KPYG_RICCO3.00E-77Pyruvate kinase isozyme G, chloroplastic (Fragment)
trEMBLtr|V7CH30|V7CH30_PHAVU9.00E-76Pyruvate kinase {ECO:0000256|RuleBase:RU000504} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016755081061670+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00873PK, pyk EC:2.7.1.40 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230
Viral carcinogenesismap05203
Type II diabetes mellitusmap04930


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0000287  magnesium ion binding

GO:0003824  catalytic activity

GO:0004743  pyruvate kinase activity

GO:0030955  potassium ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001675s00036200.1PF08370.6PDR_assoc2673258.00E-19
Glyur001675s00036200.1PF00224.16PK3324623.10E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.691
SRR1783600control3.825
SRR1783602moderate drought stress6.355
SRR1811619moderate drought stress5.958

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.434
DRR006520Root Summer glycyrrhizin high producing strain7.228
DRR006521Root Winter glycyrrhizin high producing strain4.060
DRR006522Root Winter glycyrrhizin high producing strain3.720
DRR006523Root Summer glycyrrhizin low producing strain5.530
DRR006524Root Summer glycyrrhizin low producing strain5.912
DRR006525Leaf Summer glycyrrhizin high producing strain4.667
DRR006526Leaf Summer glycyrrhizin high producing strain4.463

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.180
SRR2868004Drought Stress(Tissue:root)16.501
SRR2967015Control (Tissue:root)15.417

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.562
SRR9715740Leave2.296
SRR9715741Leave2.338
SRR9715739Root0.461
SRR9715742Root3.822
SRR9715743Root3.674

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.200
SRR8749028MeJA induced 9h34.430
SRR8749029MeJA induced 9h18.957
SRR8749030Uninduced10.870
SRR8749031Uninduced5.611
SRR8749032Uninduced4.600

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.114
SRR8400027Control-Root13.290

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved