Gene detail information of Glyur001676s00030622.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G30870.10Restriction endonuclease, type II-like superfamily protein
NRXP_004513369.10PREDICTED: crossover junction endonuclease MUS81-like [Cicer arietinum]
Swissprottr|Q5W9E7|MUS81_ARATH0Crossover junction endonuclease MUS81
trEMBLtr|G7J1L2|G7J1L2_MEDTR0Crossover junction endonuclease MUS81-like protein {ECO:0000313|EMBL:AES69126.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016764121448488+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08991MUS81 EC:3.1.22.- Homologous recombination map03440
Fanconi anemia pathwaymap03460


Gene Ontology

biological_process

GO:0006259  DNA metabolic process


molecular_function

GO:0003677  DNA binding

GO:0004518  nuclease activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001676s00030622.1PF02732.10ERCC44085381.00E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.967
SRR1783600control1.036
SRR1783602moderate drought stress0.841
SRR1811619moderate drought stress0.830

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.497
DRR006520Root Summer glycyrrhizin high producing strain1.297
DRR006521Root Winter glycyrrhizin high producing strain2.257
DRR006522Root Winter glycyrrhizin high producing strain2.050
DRR006523Root Summer glycyrrhizin low producing strain2.201
DRR006524Root Summer glycyrrhizin low producing strain2.431
DRR006525Leaf Summer glycyrrhizin high producing strain0.631
DRR006526Leaf Summer glycyrrhizin high producing strain0.740

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.965
SRR2868004Drought Stress(Tissue:root)4.116
SRR2967015Control (Tissue:root)3.500

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.295
SRR9715740Leave0.686
SRR9715741Leave1.556
SRR9715739Root0.293
SRR9715742Root1.588
SRR9715743Root1.780

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.350
SRR8749028MeJA induced 9h7.258
SRR8749029MeJA induced 9h5.629
SRR8749030Uninduced2.644
SRR8749031Uninduced1.010
SRR8749032Uninduced1.182

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.113
SRR8400027Control-Root3.738

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved