Gene detail information of Glyur001681s00028852.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42150.11.00E-102Glutathione S-transferase family protein
NRXP_004500926.10PREDICTED: prostaglandin E synthase 2-like [Cicer arietinum]
COGYP_003263165.12.00E-40glutathione S-transferase domain-containing protein [Halothiobacillus neapolitanus c2]
trEMBLtr|G7J598|G7J598_MEDTR9.00E-179Glutathione S-transferase-related protein {ECO:0000313|EMBL:AES74026.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016812157824213-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05309PTGES2 EC:5.3.99.3 Arachidonic acid metabolism map00590


Gene Ontology

biological_process

GO:0045454  cell redox homeostasis


molecular_function

GO:0005515  protein binding

GO:0009055  electron carrier activity

GO:0015035  protein disulfide oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001681s00028852.2PF13417.1GST_N_3941591.90E-13
Glyur001681s00028852.2PF14497.1GST_C_31843076.00E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control77.738
SRR1783600control77.431
SRR1783602moderate drought stress146.346
SRR1811619moderate drought stress145.298

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain95.414
DRR006520Root Summer glycyrrhizin high producing strain94.849
DRR006521Root Winter glycyrrhizin high producing strain44.359
DRR006522Root Winter glycyrrhizin high producing strain42.654
DRR006523Root Summer glycyrrhizin low producing strain94.669
DRR006524Root Summer glycyrrhizin low producing strain94.573
DRR006525Leaf Summer glycyrrhizin high producing strain12.192
DRR006526Leaf Summer glycyrrhizin high producing strain11.945

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.692
SRR2868004Drought Stress(Tissue:root)23.705
SRR2967015Control (Tissue:root)23.528

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.469
SRR9715740Leave17.957
SRR9715741Leave14.059
SRR9715739Root45.546
SRR9715742Root62.900
SRR9715743Root57.780

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h68.995
SRR8749028MeJA induced 9h42.681
SRR8749029MeJA induced 9h53.782
SRR8749030Uninduced8.783
SRR8749031Uninduced4.838
SRR8749032Uninduced19.375

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root49.818
SRR8400027Control-Root39.608

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved