Gene detail information of Glyur001685s00029134.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G55500.18.00E-174beta-1,2-xylosyltransferase
NRXP_004500132.10PREDICTED: beta-(1,2)-xylosyltransferase-like [Cicer arietinum]
COGYP_007118580.11.00E-06hypothetical protein Osc7112_5970 [Oscillatoria nigro-viridis PCC 7112]
Swissprottr|Q9LDH0|XYLT_ARATH0Beta-(1,2)-xylosyltransferase
trEMBLtr|Q4VWQ6|Q4VWQ6_MEDSA0Beta 1,2 xylosyltransferase {ECO:0000313|EMBL:AAQ73546.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016853945242827-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT61


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03714XYLT EC:2.4.2.38 Various types of N-glycan biosynthesis map00513


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001685s00029134.1PF04577.9DUF5632394861.30E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.944
SRR1783600control31.255
SRR1783602moderate drought stress52.778
SRR1811619moderate drought stress52.385

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.688
DRR006520Root Summer glycyrrhizin high producing strain34.226
DRR006521Root Winter glycyrrhizin high producing strain41.325
DRR006522Root Winter glycyrrhizin high producing strain40.490
DRR006523Root Summer glycyrrhizin low producing strain30.735
DRR006524Root Summer glycyrrhizin low producing strain30.826
DRR006525Leaf Summer glycyrrhizin high producing strain15.550
DRR006526Leaf Summer glycyrrhizin high producing strain15.662

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.718
SRR2868004Drought Stress(Tissue:root)60.719
SRR2967015Control (Tissue:root)78.727

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.897
SRR9715740Leave27.132
SRR9715741Leave27.608
SRR9715739Root39.553
SRR9715742Root35.503
SRR9715743Root37.560

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.169
SRR8749028MeJA induced 9h39.919
SRR8749029MeJA induced 9h14.112
SRR8749030Uninduced26.869
SRR8749031Uninduced27.909
SRR8749032Uninduced23.831

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.454
SRR8400027Control-Root40.620

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved