Gene detail information of Glyur001691s00029478.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05010.12.00E-132ethylene-forming enzyme
NRXP_003549632.10PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase-like [Glycine max]
COGYP_003514298.16.00E-282OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
Swissprottr|P31237|ACCO_ACTDE01-aminocyclopropane-1-carboxylate oxidase
trEMBLtr|I1MR21|I1MR21_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G01330.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016913017332078-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05933E1.14.17.4 EC:1.14.17.4 Cysteine and methionine metabolism map00270


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001691s00029478.1PF14226.1DIOX_N5963.30E-17
Glyur001691s00029478.1PF03171.152OG-FeII_Oxy1582537.20E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.126
SRR1783600control13.259
SRR1783602moderate drought stress12.287
SRR1811619moderate drought stress13.200

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.652
DRR006520Root Summer glycyrrhizin high producing strain18.769
DRR006521Root Winter glycyrrhizin high producing strain3.840
DRR006522Root Winter glycyrrhizin high producing strain3.574
DRR006523Root Summer glycyrrhizin low producing strain37.284
DRR006524Root Summer glycyrrhizin low producing strain37.182
DRR006525Leaf Summer glycyrrhizin high producing strain1.895
DRR006526Leaf Summer glycyrrhizin high producing strain1.923

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.629
SRR2868004Drought Stress(Tissue:root)36.399
SRR2967015Control (Tissue:root)30.126

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.818
SRR9715740Leave3.919
SRR9715741Leave2.738
SRR9715739Root5.549
SRR9715742Root19.744
SRR9715743Root18.336

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.891
SRR8749028MeJA induced 9h0.515
SRR8749029MeJA induced 9h0.516
SRR8749030Uninduced0.517
SRR8749031Uninduced0.257
SRR8749032Uninduced0.342

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.714
SRR8400027Control-Root24.025

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved