Gene detail information of Glyur001694s00031560.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G47990.11.00E-89gibberellin 2-oxidase 4
NRKEH32362.10plant gibberellin 2-oxidase [Medicago truncatula]
COGYP_006370287.13.00E-28putative iron/ascorbate oxidoreductase [Tistrella mobilis KA081020-065]
Swissprottr|Q9XHM5|G2OX2_PEA3.00E-121Gibberellin 2-beta-dioxygenase 2
trEMBLtr|A0A072URT7|A0A072URT7_MEDTR0Plant gibberellin 2-oxidase {ECO:0000313|EMBL:KEH32362.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold016941199916204-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04125E1.14.11.13 EC:1.14.11.13 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001694s00031560.1PF14226.1DIOX_N22811.80E-16
Glyur001694s00031560.1PF03171.152OG-FeII_Oxy1692831.20E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.213
SRR1783600control0.216
SRR1783602moderate drought stress0.112
SRR1811619moderate drought stress0.091

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.411
DRR006520Root Summer glycyrrhizin high producing strain0.551
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.107
DRR006524Root Summer glycyrrhizin low producing strain0.062
DRR006525Leaf Summer glycyrrhizin high producing strain0.553
DRR006526Leaf Summer glycyrrhizin high producing strain0.735

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.771
SRR2868004Drought Stress(Tissue:root)7.638
SRR2967015Control (Tissue:root)5.070

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.542
SRR9715740Leave0.449
SRR9715741Leave0.884
SRR9715739Root1.158
SRR9715742Root0.291
SRR9715743Root0.358

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.181
SRR8749028MeJA induced 9h1.995
SRR8749029MeJA induced 9h0.304
SRR8749030Uninduced0.622
SRR8749031Uninduced0.103
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.828
SRR8400027Control-Root1.112

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved