Gene detail information of Glyur001723s00036239.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05340.12.00E-107Peroxidase superfamily protein
NRXP_011080818.10PREDICTED: uncharacterized protein LOC105163979 [Sesamum indicum]
Swissprottr|P22195|PER1_ARAHY3.00E-163Cationic peroxidase 1 (Precursor)
trEMBLtr|A0A068UD44|A0A068UD44_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_22 {ECO:0000313|EMBL:CDP06406.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold017231062121354-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001723s00036239.1PF00141.18peroxidase262624.30E-77
Glyur001723s00036239.1PF00141.18peroxidase3095281.20E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.068
SRR1783600control5.154
SRR1783602moderate drought stress3.584
SRR1811619moderate drought stress3.603

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.284
DRR006520Root Summer glycyrrhizin high producing strain0.292
DRR006521Root Winter glycyrrhizin high producing strain2.727
DRR006522Root Winter glycyrrhizin high producing strain2.924
DRR006523Root Summer glycyrrhizin low producing strain0.311
DRR006524Root Summer glycyrrhizin low producing strain0.302
DRR006525Leaf Summer glycyrrhizin high producing strain0.051
DRR006526Leaf Summer glycyrrhizin high producing strain0.052

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.591
SRR2868004Drought Stress(Tissue:root)9.190
SRR2967015Control (Tissue:root)4.964

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.406
SRR9715740Leave0.345
SRR9715741Leave1.231
SRR9715739Root3.834
SRR9715742Root0.368
SRR9715743Root0.947

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h325.649
SRR8749028MeJA induced 9h163.064
SRR8749029MeJA induced 9h137.476
SRR8749030Uninduced7.502
SRR8749031Uninduced0.196
SRR8749032Uninduced1.744

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.534
SRR8400027Control-Root2.419

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved