Gene detail information of Glyur001726s00035056.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G68830.10STT7 homolog STN7
NRXP_004490278.10PREDICTED: serine/threonine-protein kinase STN7, chloroplastic-like isoform X2 [Cicer arietinum]
COGYP_007142243.13.00E-09serine/threonine protein kinase [Crinalium epipsammum PCC 9333]
Swissprottr|Q9S713|STT7_ARATH0Serine/threonine-protein kinase STN7, chloroplastic (Precursor)
trEMBLtr|G7JX40|G7JX40_MEDTR0Serine/Threonine kinase domain protein {ECO:0000313|EMBL:AES97381.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold017264058445247-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001726s00035056.1PF00069.20Pkinase1574761.50E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.408
SRR1783600control2.490
SRR1783602moderate drought stress4.050
SRR1811619moderate drought stress4.017

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.465
DRR006520Root Summer glycyrrhizin high producing strain3.373
DRR006521Root Winter glycyrrhizin high producing strain13.276
DRR006522Root Winter glycyrrhizin high producing strain13.063
DRR006523Root Summer glycyrrhizin low producing strain3.706
DRR006524Root Summer glycyrrhizin low producing strain3.687
DRR006525Leaf Summer glycyrrhizin high producing strain78.839
DRR006526Leaf Summer glycyrrhizin high producing strain78.429

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.038
SRR2868004Drought Stress(Tissue:root)18.800
SRR2967015Control (Tissue:root)16.503

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave80.163
SRR9715740Leave106.829
SRR9715741Leave94.772
SRR9715739Root1.671
SRR9715742Root3.396
SRR9715743Root3.476

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.865
SRR8749028MeJA induced 9h11.262
SRR8749029MeJA induced 9h7.079
SRR8749030Uninduced3.471
SRR8749031Uninduced1.867
SRR8749032Uninduced2.783

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.914
SRR8400027Control-Root9.997

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved