Gene detail information of Glyur001733s00027629.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78980.10STRUBBELIG-receptor family 5
NRKHN38109.10Protein STRUBBELIG-RECEPTOR FAMILY 5 [Glycine soja]
COGYP_004429344.11.00E-20leucine-rich repeat-containing protein [Krokinobacter sp. 4H-3-7-5]
Swissprottr|Q6R2K1|SRF5_ARATH0Protein STRUBBELIG-RECEPTOR FAMILY 5 (Precursor)
trEMBLtr|I1KVV7|I1KVV7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G24170.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold017334814057517-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001733s00027629.1PF08263.7LRRNT_226662.50E-08
Glyur001733s00027629.1PF00560.28LRR_11171351.2
Glyur001733s00027629.1PF13855.1LRR_81401971.50E-08
Glyur001733s00027629.1PF07714.12Pkinase_Tyr4056692.00E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.024
SRR1783600control3.978
SRR1783602moderate drought stress8.165
SRR1811619moderate drought stress8.051

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.368
DRR006520Root Summer glycyrrhizin high producing strain8.078
DRR006521Root Winter glycyrrhizin high producing strain7.492
DRR006522Root Winter glycyrrhizin high producing strain7.409
DRR006523Root Summer glycyrrhizin low producing strain2.733
DRR006524Root Summer glycyrrhizin low producing strain2.710
DRR006525Leaf Summer glycyrrhizin high producing strain9.626
DRR006526Leaf Summer glycyrrhizin high producing strain9.637

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.983
SRR2868004Drought Stress(Tissue:root)7.117
SRR2967015Control (Tissue:root)8.133

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.118
SRR9715740Leave3.905
SRR9715741Leave5.045
SRR9715739Root0.520
SRR9715742Root1.411
SRR9715743Root1.697

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.838
SRR8749028MeJA induced 9h5.385
SRR8749029MeJA induced 9h2.925
SRR8749030Uninduced4.770
SRR8749031Uninduced3.237
SRR8749032Uninduced3.843

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.033
SRR8400027Control-Root5.127

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved