Gene detail information of Glyur001749s00029860.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49690.1 | 8.00E-36 | myb domain protein 84 |
| NR | KEH39973.1 | 6.54E-97 | myb transcription factor [Medicago truncatula] |
| Swissprot | tr|Q9M2Y9|RAX3_ARATH | 2.00E-47 | Transcription factor RAX3 |
| trEMBL | tr|A0A072VEW3|A0A072VEW3_MEDTR | 2.00E-97 | Myb transcription factor {ECO:0000313|EMBL:KEH39973.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01749 | 4744 | 6852 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001749s00029860.1 | PF13921.1 | Myb_DNA-bind_6 | 17 | 67 | 5.90E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.504 |
| SRR1783600 | control | 7.582 |
| SRR1783602 | moderate drought stress | 8.963 |
| SRR1811619 | moderate drought stress | 8.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.306 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.293 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.373 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.277 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.254 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 22.081 |
| SRR2868004 | Drought Stress(Tissue:root) | 19.449 |
| SRR2967015 | Control (Tissue:root) | 18.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.345 |
| SRR9715740 | Leave | 0.027 |
| SRR9715741 | Leave | 0.342 |
| SRR9715739 | Root | 4.315 |
| SRR9715742 | Root | 3.544 |
| SRR9715743 | Root | 4.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.003 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.973 |
| SRR8400027 | Control-Root | 12.508 |