Gene detail information of Glyur001753s00036808.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33070.1 | 5.00E-32 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein |
| NR | XP_003542972.1 | 2.91E-45 | PREDICTED: pyruvate decarboxylase 1-like [Glycine max] |
| COG | YP_001834435.1 | 5.00E-06 | thiamine pyrophosphate binding domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] |
| Swissprot | tr|P51850|PDC1_PEA | 2.00E-43 | Pyruvate decarboxylase 1 |
| trEMBL | tr|I1M1V8|I1M1V8_SOYBN | 1.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G30490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01753 | 14811 | 15540 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01568 | PDC, pdc | EC:4.1.1.1 | Glycolysis / Gluconeogenesis | map00010 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.758 |
| SRR1783600 | control | 0.734 |
| SRR1783602 | moderate drought stress | 0.979 |
| SRR1811619 | moderate drought stress | 1.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.241 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.478 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.879 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.573 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.470 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.346 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.134 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.177 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.219 |
| SRR2967015 | Control (Tissue:root) | 0.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.283 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.377 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.156 |
| SRR8749028 | MeJA induced 9h | 3.696 |
| SRR8749029 | MeJA induced 9h | 2.894 |
| SRR8749030 | Uninduced | 0.522 |
| SRR8749031 | Uninduced | 2.761 |
| SRR8749032 | Uninduced | 0.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.115 |
| SRR8400027 | Control-Root | 0.172 |