Gene detail information of Glyur001761s00036824.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G10520.12.00E-50DNA polymerase lambda (POLL)
NRXP_004516777.19.08E-64PREDICTED: DNA polymerase lambda-like isoform X2 [Cicer arietinum]
trEMBLtr|V4SV18|V4SV18_9ROSI4.00E-64Uncharacterized protein {ECO:0000313|EMBL:ESR51713.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold017611100618721-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03512POLL EC:2.7.7.7 4.2.99.- Base excision repair map03410
Non-homologous end-joiningmap03450


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003887  DNA-directed DNA polymerase activity

GO:0034061  DNA polymerase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001761s00036824.1PF10391.4DNA_pol_lambd_f53809.50E-08
Glyur001761s00036824.1PF14791.1DNA_pol_B_thumb1171892.00E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.663
SRR1783600control0.786
SRR1783602moderate drought stress2.667
SRR1811619moderate drought stress2.059

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.707
DRR006520Root Summer glycyrrhizin high producing strain0.875
DRR006521Root Winter glycyrrhizin high producing strain0.327
DRR006522Root Winter glycyrrhizin high producing strain0.449
DRR006523Root Summer glycyrrhizin low producing strain0.481
DRR006524Root Summer glycyrrhizin low producing strain0.446
DRR006525Leaf Summer glycyrrhizin high producing strain0.728
DRR006526Leaf Summer glycyrrhizin high producing strain1.488

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.959
SRR2868004Drought Stress(Tissue:root)1.902
SRR2967015Control (Tissue:root)0.162

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.383
SRR9715740Leave2.643
SRR9715741Leave2.420
SRR9715739Root0.062
SRR9715742Root1.170
SRR9715743Root1.508

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.091
SRR8749028MeJA induced 9h0.096
SRR8749029MeJA induced 9h0.076
SRR8749030Uninduced0.113
SRR8749031Uninduced0.035
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.949
SRR8400027Control-Root3.375

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved