Gene detail information of Glyur001762s00040929.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77490.12.00E-169thylakoidal ascorbate peroxidase
NRXP_003523435.20PREDICTED: L-ascorbate peroxidase S, chloroplastic/mitochondrial-like isoform 2 [Glycine max]
COGYP_760812.19.00E-16catalase/peroxidase HPI [Hyphomonas neptunium ATCC 15444]
Swissprottr|Q42593|APXT_ARATH0L-ascorbate peroxidase T, chloroplastic (Precursor)
trEMBLtr|I1JZ45|I1JZ45_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G42720.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold017625199259068-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00434E1.11.1.11 EC:1.11.1.11 Ascorbate and aldarate metabolism map00053
Glutathione metabolismmap00480


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001762s00040929.1PF00141.18peroxidase1173484.40E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control83.531
SRR1783600control84.360
SRR1783602moderate drought stress44.830
SRR1811619moderate drought stress45.236

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain84.111
DRR006520Root Summer glycyrrhizin high producing strain82.530
DRR006521Root Winter glycyrrhizin high producing strain55.654
DRR006522Root Winter glycyrrhizin high producing strain54.784
DRR006523Root Summer glycyrrhizin low producing strain66.363
DRR006524Root Summer glycyrrhizin low producing strain67.179
DRR006525Leaf Summer glycyrrhizin high producing strain89.091
DRR006526Leaf Summer glycyrrhizin high producing strain88.685

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)128.454
SRR2868004Drought Stress(Tissue:root)92.505
SRR2967015Control (Tissue:root)84.853

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave100.505
SRR9715740Leave86.056
SRR9715741Leave108.240
SRR9715739Root96.487
SRR9715742Root100.550
SRR9715743Root97.712

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h112.525
SRR8749028MeJA induced 9h183.071
SRR8749029MeJA induced 9h87.971
SRR8749030Uninduced56.105
SRR8749031Uninduced44.605
SRR8749032Uninduced47.004

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root127.219
SRR8400027Control-Root100.288

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved