Gene detail

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Gene detail information of Glyur001767s00042095.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G01590.2	1.00E-96	Galactose mutarotase-like superfamily protein
NR	KHN18019.1	5.82E-159	Putative glucose-6-phosphate 1-epimerase [Glycine soja]
COG	YP_001022382.1	7.00E-37	aldose 1-epimerase [Methylibium petroleiphilum PM1]
Swissprot	tr\|Q40784\|AAPC_CENCI	1.00E-104	Putative glucose-6-phosphate 1-epimerase
trEMBL	tr\|I1N6Z9\|I1N6Z9_SOYBN	3.00E-160	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G09050.1}

Sequence

Transcript Sequence

>Glyur001767s00042095.1
TGATATTGAAATTCTCCTCTTCCACGTTAAGCAGGGTCCCTCTTCATTCACTCTCTTTGTCTTTTCTTCTTCACTGTTTTTATAACTTTATATCCACAAACAAGCAATCAAACATGGACTCTTGGGAAAACGCAGAGTTATGTTATGGGCGCTGGCTGTCTCTTCAAAACTCCTAACCAATAAAACACCTCATAGTATTATAAGTAAAAAAATAAAAAATTGCCTCAAAACTGGATTGGAAGAAAGGTTGTGAGTAGCATAAGGGCGAGGTTAAGGCCGAGACCGATGCCAATGAATATGTTTCAGGACATANATGGATTGCCCCGGATTATATTGACTGAGCCAACTGGTTCATCAGCAGAGGTGCTTCTATATGGAGGAAAGGTTGTTTCTTGGAAGAATGAAAGGAAGGAAGAACTGCTTTTTATGAGCAGTAAGGCTAAATGGAAACAATCTAAAGCAATCAGGGGAGGCGTATCAGTTTGCTTTCCACAGTTTGAAAATCTTGGCTCTCTAGAACAACATGGATTTGCAAGAGACAGATTGTGGTCATTGGATAGGGACCCTTCACCTCTACCCCCATCAGACAATCAGTCCTCTGTGGATCTGATATTAAAGTCAACAGGAGTTGACTTGAAGACATGGCCCCATAGTGAAGTGCGTGTTGAGGGATTGGAAACACTCGATTACTTTGACAATCTGCAAAGCAGATCAAGGTTCACAGAGCAAGCAGATGCAATTACTTTTGATGGCCAGATTGATAGAGTGTACCTTCGCACCCCAACAAAAATTGCCATCATAGACCATGAAAAGAAAAGAACTTTTGTACTCCAGAAGAATGCAATGCCAGATGCAGTAGTATGGAATCCTGGGCACAAGAAGGCCAAGGCTTTACCAGATTTGGGGGATGATGATTACAAGTCCATGATATGTGTGAATTCTGCAGCTATTGAGACCCCAATTGTGTTGAAGCCCTCTCAAGAATGGAAGGGCTACCAAGAGATCTCTACAGTTTCATCAAGCTATTGTAGTGGACAATTGGATCCTCTCAAGGTTCTTTATGGTTTTCATTCACCTTCTTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01767	45521	48613	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01792	E5.1.3.15	EC:5.1.3.15	Glycolysis / Gluconeogenesis	map00010

Gene Ontology

biological_process
GO:0005975 carbohydrate metabolic process

molecular_function GO:0003824 catalytic activity GO:0016853 isomerase activity GO:0030246 carbohydrate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001767s00042095.1	PF01263.15	Aldose_epim	119	240	6.20E-22

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.312
SRR1783600	control	4.272
SRR1783602	moderate drought stress	4.724
SRR1811619	moderate drought stress	4.884

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.708
DRR006520	Root Summer glycyrrhizin high producing strain	21.099
DRR006521	Root Winter glycyrrhizin high producing strain	15.229
DRR006522	Root Winter glycyrrhizin high producing strain	15.626
DRR006523	Root Summer glycyrrhizin low producing strain	32.507
DRR006524	Root Summer glycyrrhizin low producing strain	31.559
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.211
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.214

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	2.002
SRR2868004	Drought Stress(Tissue:root)	2.170
SRR2967015	Control (Tissue:root)	1.713

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.939
SRR9715740	Leave	0.486
SRR9715741	Leave	0.464
SRR9715739	Root	0.981
SRR9715742	Root	1.252
SRR9715743	Root	0.387

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.245
SRR8749028	MeJA induced 9h	0.127
SRR8749029	MeJA induced 9h	0.384
SRR8749030	Uninduced	0.457
SRR8749031	Uninduced	1.146
SRR8749032	Uninduced	0.427

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.962
SRR8400027	Control-Root	1.238