Gene detail information of Glyur001778s00033618.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G07580.14.00E-18Integrase-type DNA-binding superfamily protein
NRXP_007145470.11.91E-64hypothetical protein PHAVU_007G241800g [Phaseolus vulgaris]
Swissprottr|Q9LY05|EF106_ARATH2.00E-36Ethylene-responsive transcription factor ERF106
trEMBLtr|V7BHU0|V7BHU0_PHAVU7.00E-65Uncharacterized protein {ECO:0000313|EMBL:ESW17464.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold017783520335886-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001778s00033618.1PF00847.15AP21311825.90E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.789
SRR1783600control3.603
SRR1783602moderate drought stress10.205
SRR1811619moderate drought stress10.273

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.184
DRR006520Root Summer glycyrrhizin high producing strain0.942
DRR006521Root Winter glycyrrhizin high producing strain1.631
DRR006522Root Winter glycyrrhizin high producing strain3.018
DRR006523Root Summer glycyrrhizin low producing strain5.067
DRR006524Root Summer glycyrrhizin low producing strain5.231
DRR006525Leaf Summer glycyrrhizin high producing strain51.505
DRR006526Leaf Summer glycyrrhizin high producing strain49.181

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.045
SRR2868004Drought Stress(Tissue:root)3.739
SRR2967015Control (Tissue:root)11.391

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.487
SRR9715740Leave26.507
SRR9715741Leave34.367
SRR9715739Root0.652
SRR9715742Root0.673
SRR9715743Root1.304

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.304
SRR8749028MeJA induced 9h43.908
SRR8749029MeJA induced 9h47.241
SRR8749030Uninduced10.022
SRR8749031Uninduced19.160
SRR8749032Uninduced20.309

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.082
SRR8400027Control-Root5.756

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved