Gene detail information of Glyur001780s00035668.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G18830.1 | 3.00E-30 | ovate family protein 5 |
| NR | KHN47391.1 | 5.30E-127 | hypothetical protein glysoja_020259 [Glycine soja] |
| Swissprot | tr|Q8VZN1|OFP5_ARATH | 7.00E-41 | Transcription repressor OFP5 |
| trEMBL | tr|K7M179|K7M179_SOYBN | 4.00E-127 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G29770.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01780 | 50099 | 51235 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001780s00035668.1 | PF04844.8 | Ovate | 304 | 361 | 1.90E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.161 |
| SRR1783600 | control | 0.162 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.393 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.383 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.320 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.037 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.170 |
| SRR2967015 | Control (Tissue:root) | 0.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.933 |
| SRR9715740 | Leave | 2.235 |
| SRR9715741 | Leave | 4.458 |
| SRR9715739 | Root | 0.044 |
| SRR9715742 | Root | 0.682 |
| SRR9715743 | Root | 0.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.973 |
| SRR8749028 | MeJA induced 9h | 4.073 |
| SRR8749029 | MeJA induced 9h | 6.025 |
| SRR8749030 | Uninduced | 4.054 |
| SRR8749031 | Uninduced | 12.509 |
| SRR8749032 | Uninduced | 9.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.131 |
| SRR8400027 | Control-Root | 0.121 |