Gene detail information of Glyur001785s00037277.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09710.1 | 1.00E-37 | Homeodomain-like superfamily protein |
| NR | XP_006578284.1 | 1.35E-100 | PREDICTED: uncharacterized protein LOC100805773 isoform X2 [Glycine max] |
| trEMBL | tr|K7KJ58|K7KJ58_SOYBN | 5.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G10185.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01785 | 29365 | 32873 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001785s00037277.1 | PF00249.26 | Myb_DNA-binding | 235 | 284 | 1.60E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.086 |
| SRR1811619 | moderate drought stress | 0.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.125 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.125 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.167 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.593 |
| SRR2967015 | Control (Tissue:root) | 0.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.074 |
| SRR9715739 | Root | 0.141 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.002 |
| SRR8749028 | MeJA induced 9h | 4.024 |
| SRR8749029 | MeJA induced 9h | 6.282 |
| SRR8749030 | Uninduced | 3.763 |
| SRR8749031 | Uninduced | 1.866 |
| SRR8749032 | Uninduced | 4.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.210 |
| SRR8400027 | Control-Root | 0.029 |