Gene detail information of Glyur001790s00032821.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69010.1 | 3.00E-85 | BES1-interacting Myc-like protein 2 |
| NR | NP_001241235.1 | 0 | uncharacterized protein LOC100816055 [Glycine max] |
| Swissprot | tr|Q9CAA4|BIM2_ARATH | 2.00E-104 | Transcription factor BIM2 |
| trEMBL | tr|C6T7V4|C6T7V4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G13670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01790 | 38909 | 44367 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001790s00032821.1 | PF00010.21 | HLH | 11 | 60 | 1.90E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.615 |
| SRR1783600 | control | 52.360 |
| SRR1783602 | moderate drought stress | 52.367 |
| SRR1811619 | moderate drought stress | 52.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.371 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.070 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.814 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.724 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.857 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.624 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.553 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 32.623 |
| SRR2868004 | Drought Stress(Tissue:root) | 35.959 |
| SRR2967015 | Control (Tissue:root) | 34.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 23.418 |
| SRR9715740 | Leave | 30.378 |
| SRR9715741 | Leave | 26.009 |
| SRR9715739 | Root | 8.888 |
| SRR9715742 | Root | 16.278 |
| SRR9715743 | Root | 14.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.990 |
| SRR8749028 | MeJA induced 9h | 29.543 |
| SRR8749029 | MeJA induced 9h | 27.432 |
| SRR8749030 | Uninduced | 25.091 |
| SRR8749031 | Uninduced | 23.981 |
| SRR8749032 | Uninduced | 13.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 36.341 |
| SRR8400027 | Control-Root | 35.380 |