Gene detail information of Glyur001804s00033609.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58300.22.00E-168Leucine-rich repeat protein kinase family protein
NRXP_004502808.10PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum]
COGYP_004775215.11.00E-18RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9LVM0|Y5830_ARATH0Probable inactive receptor kinase At5g58300 (Precursor)
trEMBLtr|A0A072V109|A0A072V109_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH35517.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018043677239028-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001804s00033609.1PF08263.7LRRNT_231697.10E-09
Glyur001804s00033609.1PF13855.1LRR_81502023.00E-08
Glyur001804s00033609.1PF00069.20Pkinase4225841.30E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.697
SRR1783600control21.699
SRR1783602moderate drought stress18.397
SRR1811619moderate drought stress18.391

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.857
DRR006520Root Summer glycyrrhizin high producing strain34.322
DRR006521Root Winter glycyrrhizin high producing strain0.783
DRR006522Root Winter glycyrrhizin high producing strain0.702
DRR006523Root Summer glycyrrhizin low producing strain26.124
DRR006524Root Summer glycyrrhizin low producing strain26.496
DRR006525Leaf Summer glycyrrhizin high producing strain12.407
DRR006526Leaf Summer glycyrrhizin high producing strain12.235

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)83.099
SRR2868004Drought Stress(Tissue:root)59.028
SRR2967015Control (Tissue:root)67.548

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.228
SRR9715740Leave4.721
SRR9715741Leave6.550
SRR9715739Root13.103
SRR9715742Root36.271
SRR9715743Root29.018

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.116
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.062

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.502
SRR8400027Control-Root47.379

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved