Gene detail information of Glyur001804s00033612.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10850.16.00E-115Metallo-hydrolase/oxidoreductase superfamily protein
NRXP_007141335.13.40E-157hypothetical protein PHAVU_008G187100g [Phaseolus vulgaris]
COGYP_003269737.16.00E-68hydroxyacylglutathione hydrolase [Haliangium ochraceum DSM 14365]
Swissprottr|O24496|GLO2C_ARATH7.00E-144Hydroxyacylglutathione hydrolase cytoplasmic
trEMBLtr|T2DNI1|T2DNI1_PHAVU1.00E-157Uncharacterized protein {ECO:0000313|EMBL:ESW13329.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018044585850433+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01069E3.1.2.6, gloB EC:3.1.2.6 Pyruvate metabolism map00620


Gene Ontology

biological_process

GO:0006750  glutathione biosynthetic process


molecular_function

GO:0004416  hydroxyacylglutathione hydrolase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001804s00033612.1PF00753.22Lactamase_B462351.50E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.076
SRR1783600control1.360
SRR1783602moderate drought stress0.903
SRR1811619moderate drought stress0.919

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.451
DRR006520Root Summer glycyrrhizin high producing strain0.783
DRR006521Root Winter glycyrrhizin high producing strain0.812
DRR006522Root Winter glycyrrhizin high producing strain0.596
DRR006523Root Summer glycyrrhizin low producing strain1.092
DRR006524Root Summer glycyrrhizin low producing strain1.020
DRR006525Leaf Summer glycyrrhizin high producing strain1.141
DRR006526Leaf Summer glycyrrhizin high producing strain1.124

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.088
SRR2868004Drought Stress(Tissue:root)0.645
SRR2967015Control (Tissue:root)0.311

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.734
SRR9715740Leave1.171
SRR9715741Leave0.434
SRR9715739Root0.107
SRR9715742Root0.129
SRR9715743Root0.102

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.115
SRR8749028MeJA induced 9h0.101
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.132
SRR8749031Uninduced0.129
SRR8749032Uninduced0.058

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.724
SRR8400027Control-Root1.144

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved