Gene detail information of Glyur001806s00029957.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45670.10calcineurin B subunit-related
NRXP_004510893.10PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Cicer arietinum]
COGYP_008146522.13.00E-11hypothetical protein SCE1572_00225 [Sorangium cellulosum So0157-2]
Swissprottr|Q8S8S2|LPCT2_ARATH0Lysophospholipid acyltransferase LPEAT2
trEMBLtr|A0A072TP83|A0A072TP83_MEDTR01-acylglycerophosphocholine O-acyltransferase-like protein {ECO:0000313|EMBL:KEH19006.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018062815144066+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13510LPCAT1_2 EC:2.3.1.23 2.3.1.67 Glycerophospholipid metabolism map00564
Ether lipid metabolismmap00565


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001806s00029957.3PF01553.16Acyltransferase1492531.40E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.122
SRR1783600control10.171
SRR1783602moderate drought stress12.060
SRR1811619moderate drought stress11.993

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.727
DRR006520Root Summer glycyrrhizin high producing strain8.725
DRR006521Root Winter glycyrrhizin high producing strain7.699
DRR006522Root Winter glycyrrhizin high producing strain7.418
DRR006523Root Summer glycyrrhizin low producing strain7.956
DRR006524Root Summer glycyrrhizin low producing strain7.921
DRR006525Leaf Summer glycyrrhizin high producing strain6.829
DRR006526Leaf Summer glycyrrhizin high producing strain6.692

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.409
SRR2868004Drought Stress(Tissue:root)15.610
SRR2967015Control (Tissue:root)16.483

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.434
SRR9715740Leave10.608
SRR9715741Leave11.881
SRR9715739Root9.370
SRR9715742Root12.495
SRR9715743Root10.495

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.889
SRR8749028MeJA induced 9h7.500
SRR8749029MeJA induced 9h5.677
SRR8749030Uninduced3.205
SRR8749031Uninduced1.010
SRR8749032Uninduced2.706

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.533
SRR8400027Control-Root16.464

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved