Gene detail information of Glyur001808s00027716.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03250.13.00E-86UDP-GLUCOSE PYROPHOSPHORYLASE 1
NRXP_004500712.10PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like [Cicer arietinum]
COGYP_006980131.12.00E-30UTP--glucose-1-phosphate uridylyltransferase [Propionibacterium acidipropionici ATCC 4875]
Swissprottr|Q9SDX3|UGPA_MUSAC2.00E-112UTP--glucose-1-phosphate uridylyltransferase
trEMBLtr|Q2PEV2|Q2PEV2_TRIPR0Putative UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:BAE71250.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018085140757191+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00963UGP2, galU, galF EC:2.7.7.9 Pentose and glucuronate interconversions map00040
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006011  UDP-glucose metabolic process

GO:0006412  translation

GO:0008152  metabolic process


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

GO:0003983  UTP:glucose-1-phosphate uridylyltransferase activity

GO:0070569  uridylyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001808s00027716.1PF00318.15Ribosomal_S2111954.60E-38
Glyur001808s00027716.1PF01704.13UDPGP2264002.90E-45
Glyur001808s00027716.1PF01704.13UDPGP4175402.80E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.031
SRR1783600control12.799
SRR1783602moderate drought stress15.067
SRR1811619moderate drought stress14.967

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.295
DRR006520Root Summer glycyrrhizin high producing strain12.445
DRR006521Root Winter glycyrrhizin high producing strain8.041
DRR006522Root Winter glycyrrhizin high producing strain7.183
DRR006523Root Summer glycyrrhizin low producing strain11.691
DRR006524Root Summer glycyrrhizin low producing strain12.114
DRR006525Leaf Summer glycyrrhizin high producing strain9.099
DRR006526Leaf Summer glycyrrhizin high producing strain8.939

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.694
SRR2868004Drought Stress(Tissue:root)10.367
SRR2967015Control (Tissue:root)13.742

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.812
SRR9715740Leave4.569
SRR9715741Leave9.112
SRR9715739Root2.053
SRR9715742Root8.960
SRR9715743Root9.438

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.093
SRR8749028MeJA induced 9h19.718
SRR8749029MeJA induced 9h11.732
SRR8749030Uninduced2.819
SRR8749031Uninduced2.194
SRR8749032Uninduced4.746

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.651
SRR8400027Control-Root17.189

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved