Gene detail information of Glyur001815s00041763.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18550.2 | 6.00E-22 | TCP family transcription factor |
| NR | KHN22483.1 | 4.54E-52 | Transcription factor TCP18 [Glycine soja] |
| Swissprot | tr|Q9AT84|TB1_MAIZE | 2.00E-29 | Transcription factor TEOSINTE BRANCHED 1 |
| trEMBL | tr|K7KWC8|K7KWC8_SOYBN | 2.00E-51 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G23410.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01815 | 44004 | 45140 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | TCP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001815s00041763.1 | PF03634.8 | TCP | 119 | 263 | 2.40E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.436 |
| SRR1783600 | control | 0.468 |
| SRR1783602 | moderate drought stress | 0.108 |
| SRR1811619 | moderate drought stress | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.095 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.095 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.194 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.137 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.021 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.449 |
| SRR9715740 | Leave | 1.457 |
| SRR9715741 | Leave | 5.720 |
| SRR9715739 | Root | 0.003 |
| SRR9715742 | Root | 0.613 |
| SRR9715743 | Root | 0.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.407 |
| SRR8749028 | MeJA induced 9h | 0.059 |
| SRR8749029 | MeJA induced 9h | 0.161 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.011 |
| SRR8749032 | Uninduced | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.079 |
| SRR8400027 | Control-Root | 0.534 |