Gene detail information of Glyur001818s00030083.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G11850.15.00E-122Protein kinase superfamily protein
NRAES59258.20MAP kinase kinase kinase-like protein [Medicago truncatula]
COGYP_001958461.15.00E-31hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FPR3|EDR1_ARATH2.00E-114Serine/threonine-protein kinase EDR1
trEMBLtr|G7IB74|G7IB74_MEDTR0MAP kinase kinase kinase-like protein {ECO:0000313|EMBL:AES59258.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018184785056315-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04424ZAK, MLTK EC:2.7.11.25 MAPK signaling pathway map04010


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001818s00030083.1PF14381.1EDR111863.20E-58
Glyur001818s00030083.1PF07714.12Pkinase_Tyr5156201.80E-16
Glyur001818s00030083.1PF07714.12Pkinase_Tyr6217342.20E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.475
SRR1783600control9.600
SRR1783602moderate drought stress7.716
SRR1811619moderate drought stress7.871

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.456
DRR006520Root Summer glycyrrhizin high producing strain8.597
DRR006521Root Winter glycyrrhizin high producing strain19.656
DRR006522Root Winter glycyrrhizin high producing strain20.285
DRR006523Root Summer glycyrrhizin low producing strain14.034
DRR006524Root Summer glycyrrhizin low producing strain11.694
DRR006525Leaf Summer glycyrrhizin high producing strain8.042
DRR006526Leaf Summer glycyrrhizin high producing strain8.553

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.363
SRR2868004Drought Stress(Tissue:root)17.487
SRR2967015Control (Tissue:root)17.496

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.418
SRR9715740Leave9.135
SRR9715741Leave12.302
SRR9715739Root1.315
SRR9715742Root9.323
SRR9715743Root8.251

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.321
SRR8749028MeJA induced 9h30.021
SRR8749029MeJA induced 9h20.356
SRR8749030Uninduced24.053
SRR8749031Uninduced23.883
SRR8749032Uninduced21.460

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.196
SRR8400027Control-Root13.689

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved