Gene detail information of Glyur001820s00032855.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51460.24.00E-137Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
NRXP_003598212.10Trehalose-phosphate phosphatase [Medicago truncatula]
COGYP_003269585.13.00E-66trehalose-phosphatase [Haliangium ochraceum DSM 14365]
Swissprottr|O64896|TPPA_ARATH2.00E-174Trehalose-phosphate phosphatase A
trEMBLtr|G7IYG6|G7IYG6_MEDTR0Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01820773227-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01087otsB EC:3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001820s00032855.1PF02358.11Trehalose_PPase1283716.30E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.936
SRR1783600control2.093
SRR1783602moderate drought stress2.304
SRR1811619moderate drought stress2.251

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.817
DRR006520Root Summer glycyrrhizin high producing strain6.852
DRR006521Root Winter glycyrrhizin high producing strain0.157
DRR006522Root Winter glycyrrhizin high producing strain0.154
DRR006523Root Summer glycyrrhizin low producing strain3.760
DRR006524Root Summer glycyrrhizin low producing strain3.694
DRR006525Leaf Summer glycyrrhizin high producing strain2.138
DRR006526Leaf Summer glycyrrhizin high producing strain2.212

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.017
SRR2868004Drought Stress(Tissue:root)34.484
SRR2967015Control (Tissue:root)16.403

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.004
SRR9715740Leave3.456
SRR9715741Leave11.129
SRR9715739Root15.125
SRR9715742Root38.961
SRR9715743Root33.957

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h75.836
SRR8749028MeJA induced 9h49.034
SRR8749029MeJA induced 9h56.527
SRR8749030Uninduced103.858
SRR8749031Uninduced143.180
SRR8749032Uninduced77.804

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.069
SRR8400027Control-Root21.158

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved