Gene detail information of Glyur001825s00027400.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G79750.10NADP-malic enzyme 4
NRXP_004510309.10PREDICTED: NADP-dependent malic enzyme 4, chloroplastic-like [Cicer arietinum]
COGYP_007218386.10NAD-dependent malic enzyme [Thioalkalivibrio nitratireducens DSM 14787]
Swissprottr|P36444|MAOC_FLAPR0NADP-dependent malic enzyme, chloroplastic (Precursor)
trEMBLtr|I1KV22|I1KV22_SOYBN0Malic enzyme {ECO:0000256|RuleBase:RU003426}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018254884654854-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00029E1.1.1.40, maeB EC:1.1.1.40 Carbon metabolism map01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006108  malate metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004470  malic enzyme activity

GO:0004471  malate dehydrogenase (decarboxylating) (NAD+) activity

GO:0051287  NAD binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001825s00027400.1PF00390.14malic1663472.30E-78
Glyur001825s00027400.1PF03949.10Malic_M3576104.40E-91


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control67.055
SRR1783600control67.410
SRR1783602moderate drought stress98.445
SRR1811619moderate drought stress98.309

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain38.882
DRR006520Root Summer glycyrrhizin high producing strain38.234
DRR006521Root Winter glycyrrhizin high producing strain35.947
DRR006522Root Winter glycyrrhizin high producing strain34.633
DRR006523Root Summer glycyrrhizin low producing strain59.214
DRR006524Root Summer glycyrrhizin low producing strain59.611
DRR006525Leaf Summer glycyrrhizin high producing strain10.708
DRR006526Leaf Summer glycyrrhizin high producing strain10.690

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)77.284
SRR2868004Drought Stress(Tissue:root)123.475
SRR2967015Control (Tissue:root)132.338

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave36.112
SRR9715740Leave34.547
SRR9715741Leave65.618
SRR9715739Root56.696
SRR9715742Root72.356
SRR9715743Root61.277

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.995
SRR8749028MeJA induced 9h75.454
SRR8749029MeJA induced 9h24.743
SRR8749030Uninduced91.101
SRR8749031Uninduced99.204
SRR8749032Uninduced39.641

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root117.568
SRR8400027Control-Root97.069

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved