Gene detail information of Glyur001830s00040097.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37840.1 | 5.00E-45 | Protein kinase superfamily protein |
| NR | XP_006576547.1 | 9.35E-102 | PREDICTED: serine/threonine-protein kinase ATG1-like isoform X3 [Glycine max] |
| trEMBL | tr|K7KDC2|K7KDC2_SOYBN | 3.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G11280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01830 | 8050 | 17411 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.072 |
| SRR1783600 | control | 6.177 |
| SRR1783602 | moderate drought stress | 7.292 |
| SRR1811619 | moderate drought stress | 7.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.121 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.835 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.670 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.105 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.557 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.629 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.606 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.671 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.820 |
| SRR2967015 | Control (Tissue:root) | 15.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.627 |
| SRR9715740 | Leave | 5.979 |
| SRR9715741 | Leave | 7.200 |
| SRR9715739 | Root | 1.198 |
| SRR9715742 | Root | 5.201 |
| SRR9715743 | Root | 4.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.870 |
| SRR8749028 | MeJA induced 9h | 21.095 |
| SRR8749029 | MeJA induced 9h | 10.634 |
| SRR8749030 | Uninduced | 13.885 |
| SRR8749031 | Uninduced | 21.794 |
| SRR8749032 | Uninduced | 17.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.107 |
| SRR8400027 | Control-Root | 12.061 |