Gene detail information of Glyur001841s00029496.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G25530.11.00E-131glyoxylate reductase 1
NRKHN27257.10Putative oxidoreductase GLYR1 [Glycine soja]
COGYP_002604138.13.00E-106putative oxidoreductase family protein [Desulfobacterium autotrophicum HRM2]
Swissprottr|Q9LSV0|GLYR1_ARATH1.00E-165Glyoxylate/succinic semialdehyde reductase 1
trEMBLtr|I1KHZ3|I1KHZ3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G06570.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01841731411990-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18121GLYR EC:1.1.1.79 1.1.1.- Carbon metabolism map01200
Glyoxylate and dicarboxylate metabolismmap00630
Butanoate metabolismmap00650


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004616  phosphogluconate dehydrogenase (decarboxylating) activity

GO:0016491  oxidoreductase activity

GO:0051287  NAD binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001841s00029496.1PF03446.10NAD_binding_221601.30E-40
Glyur001841s00029496.1PF14833.1NAD_binding_111632813.80E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control47.943
SRR1783600control48.800
SRR1783602moderate drought stress37.262
SRR1811619moderate drought stress36.383

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.931
DRR006520Root Summer glycyrrhizin high producing strain47.260
DRR006521Root Winter glycyrrhizin high producing strain16.290
DRR006522Root Winter glycyrrhizin high producing strain15.778
DRR006523Root Summer glycyrrhizin low producing strain38.086
DRR006524Root Summer glycyrrhizin low producing strain38.650
DRR006525Leaf Summer glycyrrhizin high producing strain79.596
DRR006526Leaf Summer glycyrrhizin high producing strain80.503

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)80.770
SRR2868004Drought Stress(Tissue:root)76.929
SRR2967015Control (Tissue:root)63.497

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave99.711
SRR9715740Leave117.700
SRR9715741Leave94.566
SRR9715739Root18.981
SRR9715742Root28.770
SRR9715743Root29.806

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h68.797
SRR8749028MeJA induced 9h38.443
SRR8749029MeJA induced 9h55.463
SRR8749030Uninduced7.871
SRR8749031Uninduced1.702
SRR8749032Uninduced8.145

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root84.582
SRR8400027Control-Root89.502

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved