Gene detail information of Glyur001843s00031848.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G76360.11.00E-101Protein kinase superfamily protein
NRXP_004500871.13.61E-158PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like isoform X3 [Cicer arietinum]
COGYP_001958461.15.00E-15hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|P27450|CX32_ARATH4.00E-105Probable serine/threonine-protein kinase Cx32, chloroplastic (Precursor)
trEMBLtr|A0A072V3B8|A0A072V3B8_MEDTR3.00E-160Serine/Threonine kinase family protein {ECO:0000313|EMBL:KEH36322.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01843434123458-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001843s00031848.1PF00069.20Pkinase902183.70E-27
Glyur001843s00031848.1PF00069.20Pkinase4115891.30E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.612
SRR1783600control18.736
SRR1783602moderate drought stress13.316
SRR1811619moderate drought stress13.139

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.300
DRR006520Root Summer glycyrrhizin high producing strain23.830
DRR006521Root Winter glycyrrhizin high producing strain19.151
DRR006522Root Winter glycyrrhizin high producing strain18.790
DRR006523Root Summer glycyrrhizin low producing strain27.030
DRR006524Root Summer glycyrrhizin low producing strain26.921
DRR006525Leaf Summer glycyrrhizin high producing strain11.234
DRR006526Leaf Summer glycyrrhizin high producing strain10.936

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.875
SRR2868004Drought Stress(Tissue:root)28.030
SRR2967015Control (Tissue:root)27.042

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.850
SRR9715740Leave17.899
SRR9715741Leave31.849
SRR9715739Root22.349
SRR9715742Root23.934
SRR9715743Root23.217

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h47.868
SRR8749028MeJA induced 9h48.544
SRR8749029MeJA induced 9h42.886
SRR8749030Uninduced77.138
SRR8749031Uninduced25.048
SRR8749032Uninduced14.441

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.556
SRR8400027Control-Root35.207

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved