Gene detail information of Glyur001845s00034619.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G19800.11.00E-127myo-inositol oxygenase 2
NRXP_003630676.12.49E-178Inositol oxygenase [Medicago truncatula]
Swissprottr|O82200|MIOX2_ARATH5.00E-160Inositol oxygenase 2
trEMBLtr|G7LJN9|G7LJN9_MEDTR9.00E-179Myo-inositol oxygenase {ECO:0000313|EMBL:AET05152.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018454178947994+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00469MIOX EC:1.13.99.1 Ascorbate and aldarate metabolism map00053
Inositol phosphate metabolismmap00562


Gene Ontology

biological_process

GO:0019310  inositol catabolic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0005506  iron ion binding

GO:0050113  inositol oxygenase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001845s00034619.1PF05153.10DUF706532923.60E-107


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.000
SRR1783602moderate drought stress0.152
SRR1811619moderate drought stress0.116

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.491
DRR006520Root Summer glycyrrhizin high producing strain0.525
DRR006521Root Winter glycyrrhizin high producing strain16.750
DRR006522Root Winter glycyrrhizin high producing strain16.909
DRR006523Root Summer glycyrrhizin low producing strain0.195
DRR006524Root Summer glycyrrhizin low producing strain0.153
DRR006525Leaf Summer glycyrrhizin high producing strain0.699
DRR006526Leaf Summer glycyrrhizin high producing strain0.685

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.676
SRR2868004Drought Stress(Tissue:root)8.632
SRR2967015Control (Tissue:root)10.215

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.695
SRR9715740Leave1.313
SRR9715741Leave2.336
SRR9715739Root0.044
SRR9715742Root0.000
SRR9715743Root0.040

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.598
SRR8749028MeJA induced 9h0.234
SRR8749029MeJA induced 9h0.082
SRR8749030Uninduced0.639
SRR8749031Uninduced2.605
SRR8749032Uninduced2.757

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.835
SRR8400027Control-Root2.901

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved