Gene detail information of Glyur001855s00032353.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77120.11.00E-71alcohol dehydrogenase 1
NRKHG08450.12.63E-155Alcohol dehydrogenase class-P -like protein [Gossypium arboreum]
COGYP_003147226.17.00E-86S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Kangiella koreensis DSM 16069]
Swissprottr|P17648|ADH_FRAAN5.00E-151Alcohol dehydrogenase
trEMBLtr|I1KAJ5|I1KAJ5_SOYBN1.00E-161Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12780.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018554725554-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18857ADH1 EC:1.1.1.1 Glycolysis / Gluconeogenesis map00010
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Tyrosine metabolismmap00350


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001855s00032353.1PF08240.7ADH_N361191.60E-19
Glyur001855s00032353.1PF00107.21ADH_zinc_N1372671.80E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control553.316
SRR1783600control545.870
SRR1783602moderate drought stress1986.183
SRR1811619moderate drought stress1939.050

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1372.639
DRR006520Root Summer glycyrrhizin high producing strain1343.770
DRR006521Root Winter glycyrrhizin high producing strain1635.477
DRR006522Root Winter glycyrrhizin high producing strain1572.125
DRR006523Root Summer glycyrrhizin low producing strain1165.628
DRR006524Root Summer glycyrrhizin low producing strain1157.831
DRR006525Leaf Summer glycyrrhizin high producing strain10.469
DRR006526Leaf Summer glycyrrhizin high producing strain10.543

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.485
SRR2868004Drought Stress(Tissue:root)4.156
SRR2967015Control (Tissue:root)26.771

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.267
SRR9715740Leave1.409
SRR9715741Leave0.870
SRR9715739Root507.654
SRR9715742Root740.558
SRR9715743Root691.952

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.087
SRR8749028MeJA induced 9h11.658
SRR8749029MeJA induced 9h2.362
SRR8749030Uninduced35.262
SRR8749031Uninduced22.016
SRR8749032Uninduced20.827

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root168.608
SRR8400027Control-Root276.528

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved