Gene detail information of Glyur001857s00043220.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77760.1 | 4.00E-172 | nitrate reductase 1 |
| NR | XP_004500600.1 | 0 | PREDICTED: inducible nitrate reductase [NADH] 2-like [Cicer arietinum] |
| COG | YP_001545630.1 | 3.00E-43 | sulfite oxidase [Herpetosiphon aurantiacus DSM 785] |
| Swissprot | tr|P39870|NIA2_SOYBN | 0 | Inducible nitrate reductase [NADH] 2 |
| trEMBL | tr|Q9SYR0|Q9SYR0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G11430.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01857 | 29644 | 32626 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K10534 | NR | EC:1.7.1.1 1.7.1.2 1.7.1.3 | Nitrogen metabolism | map00910 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001857s00043220.1 | PF00174.14 | Oxidored_molyb | 114 | 296 | 1.30E-49 |
| Glyur001857s00043220.1 | PF03404.11 | Mo-co_dimer | 322 | 420 | 5.20E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.028 |
| SRR1783600 | control | 0.028 |
| SRR1783602 | moderate drought stress | 0.059 |
| SRR1811619 | moderate drought stress | 0.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.072 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.132 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.087 |
| SRR2967015 | Control (Tissue:root) | 0.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.233 |
| SRR9715742 | Root | 0.211 |
| SRR9715743 | Root | 0.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.642 |
| SRR8400027 | Control-Root | 1.683 |