Gene detail information of Glyur001858s00037591.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G73460.10Protein kinase superfamily protein
NRXP_004515234.10PREDICTED: uncharacterized protein LOC101504249 isoform X1 [Cicer arietinum]
COGYP_004097351.18.00E-15serine/threonine protein kinase with PASTA sensor(s) [Intrasporangium calvum DSM 43043]
Swissprottr|P51567|AFC2_ARATH7.00E-43Serine/threonine-protein kinase AFC2
trEMBLtr|K7MJ17|K7MJ17_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G34510.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018582894751419+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001858s00037591.1PF00069.20Pkinase88611883.80E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.060
SRR1783600control18.972
SRR1783602moderate drought stress21.483
SRR1811619moderate drought stress21.263

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.963
DRR006520Root Summer glycyrrhizin high producing strain18.642
DRR006521Root Winter glycyrrhizin high producing strain14.341
DRR006522Root Winter glycyrrhizin high producing strain14.044
DRR006523Root Summer glycyrrhizin low producing strain20.301
DRR006524Root Summer glycyrrhizin low producing strain19.949
DRR006525Leaf Summer glycyrrhizin high producing strain10.799
DRR006526Leaf Summer glycyrrhizin high producing strain10.592

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.813
SRR2868004Drought Stress(Tissue:root)31.443
SRR2967015Control (Tissue:root)31.198

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.200
SRR9715740Leave16.702
SRR9715741Leave14.929
SRR9715739Root2.985
SRR9715742Root18.785
SRR9715743Root17.180

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.209
SRR8749028MeJA induced 9h28.251
SRR8749029MeJA induced 9h15.204
SRR8749030Uninduced10.872
SRR8749031Uninduced13.948
SRR8749032Uninduced11.147

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.510
SRR8400027Control-Root31.644

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved