Gene detail information of Glyur001864s00033364.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38240.24.00E-19alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
NRACU18645.19.90E-35unknown [Glycine max]
Swissprottr|Q9XGM8|MGAT1_ARATH2.00E-22Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
trEMBLtr|C6T9Z3|C6T9Z3_SOYBN4.00E-35Putative uncharacterized protein {ECO:0000313|EMBL:ACU18645.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01864978912937-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT13


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00726MGAT1 EC:2.4.1.101 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

biological_process

GO:0006486  protein glycosylation


molecular_function

GO:0008375  acetylglucosaminyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001864s00033364.1PF03071.10GNT-I21734.20E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.181
SRR1783600control3.027
SRR1783602moderate drought stress4.814
SRR1811619moderate drought stress4.422

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.985
DRR006520Root Summer glycyrrhizin high producing strain9.206
DRR006521Root Winter glycyrrhizin high producing strain9.113
DRR006522Root Winter glycyrrhizin high producing strain8.188
DRR006523Root Summer glycyrrhizin low producing strain7.455
DRR006524Root Summer glycyrrhizin low producing strain8.523
DRR006525Leaf Summer glycyrrhizin high producing strain5.008
DRR006526Leaf Summer glycyrrhizin high producing strain4.533

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.912
SRR2868004Drought Stress(Tissue:root)20.349
SRR2967015Control (Tissue:root)19.755

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.354
SRR9715740Leave8.912
SRR9715741Leave10.025
SRR9715739Root1.603
SRR9715742Root5.517
SRR9715743Root4.783

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.435
SRR8749028MeJA induced 9h20.624
SRR8749029MeJA induced 9h9.226
SRR8749030Uninduced7.122
SRR8749031Uninduced4.441
SRR8749032Uninduced5.428

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.108
SRR8400027Control-Root15.944

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved