Gene detail information of Glyur001876s00033005.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17220.14.00E-131Protein kinase superfamily protein
NRXP_003533415.10PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like [Glycine max]
COGYP_004571825.13.00E-20serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|P27450|CX32_ARATH3.00E-160Probable serine/threonine-protein kinase Cx32, chloroplastic (Precursor)
trEMBLtr|I1L4R2|I1L4R2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G33120.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018764574649712+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001876s00033005.1PF00069.20Pkinase993952.90E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.149
SRR1783600control3.378
SRR1783602moderate drought stress4.642
SRR1811619moderate drought stress4.629

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.774
DRR006520Root Summer glycyrrhizin high producing strain10.767
DRR006521Root Winter glycyrrhizin high producing strain7.140
DRR006522Root Winter glycyrrhizin high producing strain7.034
DRR006523Root Summer glycyrrhizin low producing strain21.649
DRR006524Root Summer glycyrrhizin low producing strain20.699
DRR006525Leaf Summer glycyrrhizin high producing strain10.489
DRR006526Leaf Summer glycyrrhizin high producing strain10.680

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.393
SRR2868004Drought Stress(Tissue:root)35.368
SRR2967015Control (Tissue:root)27.054

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.816
SRR9715740Leave21.525
SRR9715741Leave27.029
SRR9715739Root5.512
SRR9715742Root15.869
SRR9715743Root13.959

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.255
SRR8749028MeJA induced 9h16.002
SRR8749029MeJA induced 9h11.843
SRR8749030Uninduced16.091
SRR8749031Uninduced7.858
SRR8749032Uninduced5.743

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.628
SRR8400027Control-Root18.485

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved