Gene detail information of Glyur001880s00033691.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66430.12.00E-118pfkB-like carbohydrate kinase family protein
NRXP_004490806.10PREDICTED: probable fructokinase-4-like [Cicer arietinum]
COGYP_002521328.15.00E-96putative fructokinase [Thermomicrobium roseum DSM 5159]
Swissprottr|Q9C524|SCRK6_ARATH0Probable fructokinase-6, chloroplastic (Precursor)
trEMBLtr|C6TGN8|C6TGN8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G41320.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018801478219377+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00847E2.7.1.4, scrK EC:2.7.1.4 Fructose and mannose metabolism map00051
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

molecular_function

GO:0016773  phosphotransferase activity, alcohol group as acceptor



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001880s00033691.1PF00294.19PfkB662911.20E-48
Glyur001880s00033691.1PF00294.19PfkB2933491.20E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.564
SRR1783600control13.577
SRR1783602moderate drought stress11.987
SRR1811619moderate drought stress11.947

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.185
DRR006520Root Summer glycyrrhizin high producing strain9.041
DRR006521Root Winter glycyrrhizin high producing strain6.279
DRR006522Root Winter glycyrrhizin high producing strain6.020
DRR006523Root Summer glycyrrhizin low producing strain20.429
DRR006524Root Summer glycyrrhizin low producing strain20.291
DRR006525Leaf Summer glycyrrhizin high producing strain44.315
DRR006526Leaf Summer glycyrrhizin high producing strain43.521

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.142
SRR2868004Drought Stress(Tissue:root)19.793
SRR2967015Control (Tissue:root)18.660

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.248
SRR9715740Leave32.683
SRR9715741Leave26.066
SRR9715739Root6.261
SRR9715742Root12.137
SRR9715743Root10.616

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.849
SRR8749028MeJA induced 9h3.817
SRR8749029MeJA induced 9h4.413
SRR8749030Uninduced2.515
SRR8749031Uninduced0.744
SRR8749032Uninduced1.182

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.565
SRR8400027Control-Root38.081

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved