Gene detail information of Glyur001884s00039577.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51560.10Leucine-rich repeat protein kinase family protein
NRAES75836.20LRR receptor-like kinase [Medicago truncatula]
COGYP_004735589.13.00E-33Receptor-like protein kinase [Zobellia galactanivorans]
Swissprottr|Q8RY65|NIK2_ARATH4.00E-73Protein NSP-INTERACTING KINASE 2 (Precursor)
trEMBLtr|G7KMY7|G7KMY7_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES75836.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold018843783541983-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001884s00039577.1PF08263.7LRRNT_226661.80E-07
Glyur001884s00039577.1PF13855.1LRR_81412012.60E-08
Glyur001884s00039577.1PF00560.28LRR_12142361
Glyur001884s00039577.1PF07714.12Pkinase_Tyr4156763.90E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.984
SRR1783600control1.934
SRR1783602moderate drought stress0.616
SRR1811619moderate drought stress0.631

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.322
DRR006520Root Summer glycyrrhizin high producing strain3.273
DRR006521Root Winter glycyrrhizin high producing strain0.048
DRR006522Root Winter glycyrrhizin high producing strain0.047
DRR006523Root Summer glycyrrhizin low producing strain1.498
DRR006524Root Summer glycyrrhizin low producing strain1.499
DRR006525Leaf Summer glycyrrhizin high producing strain11.522
DRR006526Leaf Summer glycyrrhizin high producing strain11.459

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.333
SRR2868004Drought Stress(Tissue:root)11.231
SRR2967015Control (Tissue:root)16.620

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.891
SRR9715740Leave3.637
SRR9715741Leave2.848
SRR9715739Root4.224
SRR9715742Root2.709
SRR9715743Root3.015

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.977
SRR8749028MeJA induced 9h0.350
SRR8749029MeJA induced 9h0.962
SRR8749030Uninduced0.000
SRR8749031Uninduced0.033
SRR8749032Uninduced0.299

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.396
SRR8400027Control-Root8.623

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved