Gene detail information of Glyur001898s00042029.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43840.2 | 2.00E-106 | UDP-glycosyltransferase 74 F1 |
| NR | KEH25950.1 | 0 | UDP-glucosyltransferase family protein [Medicago truncatula] |
| COG | YP_003539446.1 | 9.00E-09 | indole-3-pyruvate decarboxylase [Erwinia amylovora ATCC 49946] |
| Swissprot | tr|O22820|U74F1_ARATH | 1.00E-127 | UDP-glycosyltransferase 74F1 |
| trEMBL | tr|A0A072UJF5|A0A072UJF5_MEDTR | 0 | UDP-glucosyltransferase family protein {ECO:0000313|EMBL:KEH25950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01898 | 47435 | 50734 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001898s00042029.1 | PF00201.13 | UDPGT | 481 | 598 | 1.80E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.266 |
| SRR1783600 | control | 1.259 |
| SRR1783602 | moderate drought stress | 0.580 |
| SRR1811619 | moderate drought stress | 0.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.492 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.430 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.297 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.289 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.833 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.883 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.146 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.453 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.017 |
| SRR2967015 | Control (Tissue:root) | 1.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.207 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.081 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.802 |
| SRR9715743 | Root | 1.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.465 |
| SRR8749028 | MeJA induced 9h | 0.130 |
| SRR8749029 | MeJA induced 9h | 0.231 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.034 |
| SRR8749032 | Uninduced | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.765 |
| SRR8400027 | Control-Root | 4.889 |