Gene detail information of Glyur001900s00037697.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G62020.15.00E-65heat shock transcription factor B2A
NRXP_004515711.19.41E-176PREDICTED: heat stress transcription factor B-2b-like [Cicer arietinum]
Swissprottr|Q9SCW4|HFB2A_ARATH3.00E-90Heat stress transcription factor B-2a
trEMBLtr|V7C2D0|V7C2D0_PHAVU9.00E-175Uncharacterized protein {ECO:0000313|EMBL:ESW24312.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019003644038097-


Gene family

Gene familysubfamily
Transcription Factors FamilyHSF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated

GO:0009408  response to heat


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001900s00037697.1PF00447.12HSF_DNA-bind341254.50E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.095
SRR1783600control14.946
SRR1783602moderate drought stress18.575
SRR1811619moderate drought stress18.059

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain71.176
DRR006520Root Summer glycyrrhizin high producing strain71.965
DRR006521Root Winter glycyrrhizin high producing strain14.084
DRR006522Root Winter glycyrrhizin high producing strain14.415
DRR006523Root Summer glycyrrhizin low producing strain75.400
DRR006524Root Summer glycyrrhizin low producing strain74.227
DRR006525Leaf Summer glycyrrhizin high producing strain22.791
DRR006526Leaf Summer glycyrrhizin high producing strain22.047

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.282
SRR2868004Drought Stress(Tissue:root)26.345
SRR2967015Control (Tissue:root)35.245

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave51.994
SRR9715740Leave58.191
SRR9715741Leave67.168
SRR9715739Root110.639
SRR9715742Root50.586
SRR9715743Root63.181

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h63.556
SRR8749028MeJA induced 9h41.414
SRR8749029MeJA induced 9h63.282
SRR8749030Uninduced24.351
SRR8749031Uninduced28.937
SRR8749032Uninduced87.716

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.781
SRR8400027Control-Root41.344

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved