Gene detail information of Glyur001901s00042932.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G21750.10PDI-like 1-1
NRKHN35506.10Protein disulfide-isomerase [Glycine soja]
COGYP_865769.15.00E-14thioredoxin [Magnetococcus marinus MC-1]
Swissprottr|P29828|PDI_MEDSA0Protein disulfide-isomerase (Precursor)
trEMBLtr|I7FST9|I7FST9_SOYBN0Protein disulfide-isomerase {ECO:0000256|RuleBase:RU361130}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0190110645738+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09580PDIA1, P4HB EC:5.3.4.1 Protein processing in endoplasmic reticulum map04141


Gene Ontology

biological_process

GO:0045454  cell redox homeostasis


cellular_component

GO:0005783  endoplasmic reticulum


molecular_function

GO:0016853  isomerase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001901s00042932.1PF00085.15Thioredoxin371442.20E-30
Glyur001901s00042932.1PF13848.1Thioredoxin_61733572.10E-22
Glyur001901s00042932.1PF00085.15Thioredoxin3814857.20E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control151.005
SRR1783600control151.448
SRR1783602moderate drought stress121.121
SRR1811619moderate drought stress120.217

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain282.091
DRR006520Root Summer glycyrrhizin high producing strain278.819
DRR006521Root Winter glycyrrhizin high producing strain181.653
DRR006522Root Winter glycyrrhizin high producing strain176.756
DRR006523Root Summer glycyrrhizin low producing strain202.386
DRR006524Root Summer glycyrrhizin low producing strain202.429
DRR006525Leaf Summer glycyrrhizin high producing strain125.764
DRR006526Leaf Summer glycyrrhizin high producing strain125.200

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)273.005
SRR2868004Drought Stress(Tissue:root)155.902
SRR2967015Control (Tissue:root)199.036

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave84.639
SRR9715740Leave112.347
SRR9715741Leave88.096
SRR9715739Root72.785
SRR9715742Root101.611
SRR9715743Root98.642

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h359.889
SRR8749028MeJA induced 9h283.031
SRR8749029MeJA induced 9h252.157
SRR8749030Uninduced247.233
SRR8749031Uninduced180.978
SRR8749032Uninduced131.484

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root190.877
SRR8400027Control-Root180.954

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved