Gene detail information of Glyur001905s00036193.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G60800.10NSP-interacting kinase 3
NRXP_003519642.10PREDICTED: protein NSP-INTERACTING KINASE 3 isoform 1 [Glycine max]
COGYP_004775215.13.00E-24RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q93ZS4|NIK3_ARATH0Protein NSP-INTERACTING KINASE 3 (Precursor)
trEMBLtr|I1JC46|I1JC46_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G04150.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019052590331401+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001905s00036193.1PF08263.7LRRNT_232712.10E-13
Glyur001905s00036193.1PF13855.1LRR_81231823.10E-08
Glyur001905s00036193.1PF00069.20Pkinase3045733.80E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.333
SRR1783600control24.489
SRR1783602moderate drought stress33.537
SRR1811619moderate drought stress33.327

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.625
DRR006520Root Summer glycyrrhizin high producing strain24.389
DRR006521Root Winter glycyrrhizin high producing strain12.258
DRR006522Root Winter glycyrrhizin high producing strain12.059
DRR006523Root Summer glycyrrhizin low producing strain30.633
DRR006524Root Summer glycyrrhizin low producing strain30.404
DRR006525Leaf Summer glycyrrhizin high producing strain14.878
DRR006526Leaf Summer glycyrrhizin high producing strain14.886

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.566
SRR2868004Drought Stress(Tissue:root)44.456
SRR2967015Control (Tissue:root)41.829

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.713
SRR9715740Leave26.359
SRR9715741Leave19.505
SRR9715739Root15.505
SRR9715742Root30.254
SRR9715743Root26.115

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.464
SRR8749028MeJA induced 9h7.162
SRR8749029MeJA induced 9h3.881
SRR8749030Uninduced6.259
SRR8749031Uninduced2.034
SRR8749032Uninduced1.834

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.453
SRR8400027Control-Root46.519

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved