Gene detail information of Glyur001925s00038515.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G17620.14.00E-30glycine-rich protein
NRXP_004511747.16.82E-37PREDICTED: protein Dom3z homolog, chloroplastic-like [Cicer arietinum]
Swissprottr|Q8RY73|DXO_ARATH1.00E-35Decapping nuclease DXO homolog, chloroplastic (Precursor)
trEMBLtr|G7JYM5|G7JYM5_MEDTR5.00E-36Dom3z-like protein {ECO:0000313|EMBL:AES94359.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019255151253318+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001925s00038515.2PF00069.20Pkinase911358.50E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.593
SRR1783600control13.233
SRR1783602moderate drought stress11.453
SRR1811619moderate drought stress10.831

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.967
DRR006520Root Summer glycyrrhizin high producing strain25.403
DRR006521Root Winter glycyrrhizin high producing strain33.016
DRR006522Root Winter glycyrrhizin high producing strain29.270
DRR006523Root Summer glycyrrhizin low producing strain24.861
DRR006524Root Summer glycyrrhizin low producing strain24.374
DRR006525Leaf Summer glycyrrhizin high producing strain12.833
DRR006526Leaf Summer glycyrrhizin high producing strain12.273

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.107
SRR2868004Drought Stress(Tissue:root)12.997
SRR2967015Control (Tissue:root)13.026

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.150
SRR9715740Leave6.203
SRR9715741Leave7.009
SRR9715739Root2.053
SRR9715742Root4.351
SRR9715743Root3.239

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.868
SRR8749028MeJA induced 9h6.030
SRR8749029MeJA induced 9h3.513
SRR8749030Uninduced5.805
SRR8749031Uninduced5.155
SRR8749032Uninduced11.283

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.238
SRR8400027Control-Root6.239

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved