Gene detail information of Glyur001941s00031286.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G16790.28.00E-49P-loop containing nucleoside triphosphate hydrolases superfamily protein
NRXP_004509854.13.69E-96PREDICTED: thermosensitive gluconokinase-like isoform X2 [Cicer arietinum]
COGYP_628884.14.00E-41thermosensitive gluconokinase [Myxococcus xanthus DK 1622]
trEMBLtr|G7LG50|G7LG50_MEDTR3.00E-95Thermosensitive gluconokinase, putative {ECO:0000313|EMBL:AET03164.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0194165719058-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00851E2.7.1.12, gntK, idnK EC:2.7.1.12 Carbon metabolism map01200
Pentose phosphate pathwaymap00030


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0016301  kinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001941s00031286.1PF01202.17SKI721984.20E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.868
SRR1783600control4.978
SRR1783602moderate drought stress3.193
SRR1811619moderate drought stress3.329

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.133
DRR006520Root Summer glycyrrhizin high producing strain6.575
DRR006521Root Winter glycyrrhizin high producing strain7.738
DRR006522Root Winter glycyrrhizin high producing strain8.090
DRR006523Root Summer glycyrrhizin low producing strain6.909
DRR006524Root Summer glycyrrhizin low producing strain6.432
DRR006525Leaf Summer glycyrrhizin high producing strain5.266
DRR006526Leaf Summer glycyrrhizin high producing strain4.925

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.770
SRR2868004Drought Stress(Tissue:root)22.200
SRR2967015Control (Tissue:root)18.083

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.515
SRR9715740Leave7.032
SRR9715741Leave11.574
SRR9715739Root0.881
SRR9715742Root3.574
SRR9715743Root2.145

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.950
SRR8749028MeJA induced 9h53.403
SRR8749029MeJA induced 9h52.723
SRR8749030Uninduced138.417
SRR8749031Uninduced92.188
SRR8749032Uninduced83.127

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.227
SRR8400027Control-Root10.843

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved