Gene detail information of Glyur001941s00031290.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G08520.1 | 2.00E-91 | Duplicated homeodomain-like superfamily protein |
| NR | XP_003532025.1 | 0 | PREDICTED: transcription factor DIVARICATA-like isoform X1 [Glycine max] |
| Swissprot | tr|Q8S9H7|DIV_ANTMA | 4.00E-65 | Transcription factor DIVARICATA |
| trEMBL | tr|K7L9L3|K7L9L3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G40020.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01941 | 23373 | 32568 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001941s00031290.2 | PF00249.26 | Myb_DNA-binding | 11 | 55 | 1.80E-10 |
| Glyur001941s00031290.2 | PF00249.26 | Myb_DNA-binding | 121 | 165 | 6.70E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.914 |
| SRR1783600 | control | 13.680 |
| SRR1783602 | moderate drought stress | 22.721 |
| SRR1811619 | moderate drought stress | 23.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.364 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.442 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 60.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 57.529 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 41.508 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 44.433 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 16.870 |
| SRR2868004 | Drought Stress(Tissue:root) | 26.174 |
| SRR2967015 | Control (Tissue:root) | 27.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 24.921 |
| SRR9715740 | Leave | 32.384 |
| SRR9715741 | Leave | 36.384 |
| SRR9715739 | Root | 6.847 |
| SRR9715742 | Root | 22.476 |
| SRR9715743 | Root | 18.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.361 |
| SRR8749028 | MeJA induced 9h | 75.529 |
| SRR8749029 | MeJA induced 9h | 42.713 |
| SRR8749030 | Uninduced | 44.634 |
| SRR8749031 | Uninduced | 38.434 |
| SRR8749032 | Uninduced | 36.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 21.705 |
| SRR8400027 | Control-Root | 21.385 |