Gene detail information of Glyur001941s00031295.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G24030.21.00E-102Protein kinase superfamily protein
NRXP_010552811.14.93E-162PREDICTED: probable receptor-like protein kinase At3g55450 [Tarenaya hassleriana]
COGYP_004864274.16.00E-18protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|Q9LQQ8|RLCK7_ARATH2.00E-58Probable serine/threonine-protein kinase RLCKVII
trEMBLtr|I1KXJ5|I1KXJ5_SOYBN4.00E-159Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G40030.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019414125947527+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001941s00031295.1PF00069.20Pkinase761265.30E-05
Glyur001941s00031295.1PF00069.20Pkinase1282506.80E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.565
SRR1783600control2.587
SRR1783602moderate drought stress2.696
SRR1811619moderate drought stress2.650

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.148
DRR006520Root Summer glycyrrhizin high producing strain2.624
DRR006521Root Winter glycyrrhizin high producing strain0.117
DRR006522Root Winter glycyrrhizin high producing strain0.047
DRR006523Root Summer glycyrrhizin low producing strain3.334
DRR006524Root Summer glycyrrhizin low producing strain3.523
DRR006525Leaf Summer glycyrrhizin high producing strain1.610
DRR006526Leaf Summer glycyrrhizin high producing strain1.693

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.627
SRR2868004Drought Stress(Tissue:root)5.499
SRR2967015Control (Tissue:root)5.389

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.489
SRR9715740Leave1.829
SRR9715741Leave1.521
SRR9715739Root0.501
SRR9715742Root2.066
SRR9715743Root2.253

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.034
SRR8749028MeJA induced 9h0.066
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.217
SRR8749031Uninduced0.253
SRR8749032Uninduced0.121

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.855
SRR8400027Control-Root13.949

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved