Gene detail information of Glyur001955s00042261.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G22250.33.00E-25aspartate aminotransferase
NRXP_003525066.11.65E-29PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Glycine max]
COGNP_621993.19.00E-16PLP-dependent aminotransferase [Thermoanaerobacter tengcongensis MB4]
Swissprottr|E9L7A5|PAT_PETHY1.00E-29Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (Precursor)
trEMBLtr|I1K4M1|I1K4M1_SOYBN6.00E-30Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G31490.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019551787321090+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15849PAT, AAT EC:2.6.1.1 2.6.1.78 2.6.1.79 Biosynthesis of amino acids map01230
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Isoquinoline alkaloid biosynthesismap00950
Tropane, piperidine and pyridine alkaloid biosynthesismap00960


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0030170  pyridoxal phosphate binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.750
SRR1783600control0.650
SRR1783602moderate drought stress0.507
SRR1811619moderate drought stress0.537

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.626
DRR006520Root Summer glycyrrhizin high producing strain1.355
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.185
DRR006525Leaf Summer glycyrrhizin high producing strain3.596
DRR006526Leaf Summer glycyrrhizin high producing strain3.563

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.854
SRR2868004Drought Stress(Tissue:root)1.889
SRR2967015Control (Tissue:root)2.180

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.249
SRR9715740Leave2.194
SRR9715741Leave1.418
SRR9715739Root0.182
SRR9715742Root0.346
SRR9715743Root0.473

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.836
SRR8749028MeJA induced 9h0.500
SRR8749029MeJA induced 9h0.694
SRR8749030Uninduced0.218
SRR8749031Uninduced0.061
SRR8749032Uninduced0.302

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.589
SRR8400027Control-Root3.867

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved