Gene detail information of Glyur001957s00039090.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G43190.10sucrose synthase 4
NRXP_004488146.10PREDICTED: sucrose synthase-like isoform X6 [Cicer arietinum]
COGYP_003529337.10sucrose synthase [Nitrosococcus halophilus Nc 4]
Swissprottr|P13708|SUSY_SOYBN0Sucrose synthase
trEMBLtr|I1MHJ6|I1MHJ6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G20180.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019573451941018+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00695E2.4.1.13 EC:2.4.1.13 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005985  sucrose metabolic process

GO:0009058  biosynthetic process


molecular_function

GO:0016157  sucrose synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001957s00039090.1PF00862.14Sucrose_synth75540
Glyur001957s00039090.1PF00534.15Glycos_transf_15647342.90E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.604
SRR1783600control38.754
SRR1783602moderate drought stress24.610
SRR1811619moderate drought stress24.736

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain64.262
DRR006520Root Summer glycyrrhizin high producing strain63.866
DRR006521Root Winter glycyrrhizin high producing strain9.008
DRR006522Root Winter glycyrrhizin high producing strain8.892
DRR006523Root Summer glycyrrhizin low producing strain39.130
DRR006524Root Summer glycyrrhizin low producing strain38.926
DRR006525Leaf Summer glycyrrhizin high producing strain60.552
DRR006526Leaf Summer glycyrrhizin high producing strain60.789

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)210.911
SRR2868004Drought Stress(Tissue:root)129.966
SRR2967015Control (Tissue:root)113.684

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave61.172
SRR9715740Leave44.043
SRR9715741Leave60.108
SRR9715739Root25.073
SRR9715742Root99.208
SRR9715743Root90.455

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h306.152
SRR8749028MeJA induced 9h712.309
SRR8749029MeJA induced 9h832.357
SRR8749030Uninduced463.812
SRR8749031Uninduced1932.088
SRR8749032Uninduced1783.927

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root99.267
SRR8400027Control-Root120.030

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved