Gene detail information of Glyur001962s00035253.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G71695.13.00E-102Peroxidase superfamily protein
NRNP_001242769.10peroxidase precursor [Glycine max]
Swissprottr|Q96520|PER12_ARATH6.00E-127Peroxidase 12 (Precursor)
trEMBLtr|C6TAQ5|C6TAQ5_SOYBN0Putative uncharacterized protein {ECO:0000313|EMBL:ACU18907.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019623978247584-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001962s00035253.1PF00141.18peroxidase632993.20E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control86.499
SRR1783600control87.030
SRR1783602moderate drought stress67.261
SRR1811619moderate drought stress66.835

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain204.305
DRR006520Root Summer glycyrrhizin high producing strain202.242
DRR006521Root Winter glycyrrhizin high producing strain5.859
DRR006522Root Winter glycyrrhizin high producing strain5.763
DRR006523Root Summer glycyrrhizin low producing strain29.546
DRR006524Root Summer glycyrrhizin low producing strain28.567
DRR006525Leaf Summer glycyrrhizin high producing strain209.360
DRR006526Leaf Summer glycyrrhizin high producing strain208.686

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)120.744
SRR2868004Drought Stress(Tissue:root)56.537
SRR2967015Control (Tissue:root)89.300

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.052
SRR9715740Leave21.305
SRR9715741Leave25.767
SRR9715739Root34.982
SRR9715742Root91.138
SRR9715743Root77.313

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.031
SRR8749028MeJA induced 9h0.029
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root140.769
SRR8400027Control-Root64.310

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved