Gene detail information of Glyur001966s00032582.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42770.22.00E-72Maf-like protein
NRXP_006600189.11.48E-127PREDICTED: uncharacterized protein LOC100792444 isoform X2 [Glycine max]
COGYP_003712941.13.00E-11hypothetical protein XNC1_2741 [Xenorhabdus nematophila ATCC 19061]
Swissprottr|Q1A173|RADL6_ARATH8.00E-30Protein RADIALIS-like 6
trEMBLtr|K9P1V7|K9P1V7_9ROSI2.00E-108Maf-like protein {ECO:0000313|EMBL:AFY26891.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01966747416626+


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001966s00032582.1PF00249.26Myb_DNA-binding6512.10E-06
Glyur001966s00032582.1PF02545.9Maf1253165.80E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.990
SRR1783600control5.253
SRR1783602moderate drought stress6.130
SRR1811619moderate drought stress6.130

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.635
DRR006520Root Summer glycyrrhizin high producing strain11.995
DRR006521Root Winter glycyrrhizin high producing strain18.330
DRR006522Root Winter glycyrrhizin high producing strain18.446
DRR006523Root Summer glycyrrhizin low producing strain8.598
DRR006524Root Summer glycyrrhizin low producing strain8.207
DRR006525Leaf Summer glycyrrhizin high producing strain15.836
DRR006526Leaf Summer glycyrrhizin high producing strain15.614

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.864
SRR2868004Drought Stress(Tissue:root)18.230
SRR2967015Control (Tissue:root)13.690

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.060
SRR9715740Leave18.606
SRR9715741Leave19.796
SRR9715739Root3.305
SRR9715742Root7.127
SRR9715743Root5.059

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.291
SRR8749028MeJA induced 9h17.052
SRR8749029MeJA induced 9h23.256
SRR8749030Uninduced17.292
SRR8749031Uninduced16.520
SRR8749032Uninduced14.805

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.256
SRR8400027Control-Root19.005

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved